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- #WINDOWS LINUX SUBSYSTEM UBUNTU INSTALL PYTHON 3.6 UPDATE#
- #WINDOWS LINUX SUBSYSTEM UBUNTU INSTALL PYTHON 3.6 PC#
- #WINDOWS LINUX SUBSYSTEM UBUNTU INSTALL PYTHON 3.6 WINDOWS#
Here is an `environment.yaml` file for the created fresh environment.How to install Python 3 in Windows Subsystem with Ubuntu # bash Miniconda3-latest-Linux-x86_64.sh -b -p /tmp/miniconda3 You could also try conda create -n scelvis -y scelvis and see whether this works.Ī clean reinstall of conda works for me: # wget Maybe we should provide environment.yaml files with each release that are known to work. The main issue here are conflicts that are upstream and out of our control. Scelvis -> dash-html-components[version=' fs Package dash-html-components conflicts for: Package dash-bootstrap-components conflicts for:
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Python=3.7 -> readline[version='>=7.0, python-irodsclient Python=3.7 -> zlib[version='>=1.2.11, dash-core-components[version=' flask UnsatisfiableError: The following specifications were found to be incompatible with each other: Solving environment: failed with repodata from current_repodata.json, will retry with next repodata soĬollecting package metadata (repodata.json): doneįound conflicts! Looking for incompatible packages. Solving environment: failed with initial frozen solve. I copy the two errors below in case it is relevant.Įrror before upgrade: (base) :/mnt/c/Users/munfred$ conda install -c bioconda scelvisĬollecting package metadata (current_repodata.json): done Not a big deal, but something to keep in mind down the road as more people try to install the package.
#WINDOWS LINUX SUBSYSTEM UBUNTU INSTALL PYTHON 3.6 UPDATE#
I then realized that maybe it was just that I needed to update Ubuntu, so I did apt get update and apt get upgrade, but still got the same error when installing with conda.
#WINDOWS LINUX SUBSYSTEM UBUNTU INSTALL PYTHON 3.6 PC#
Then I tried installing on another PC with a fresh install of WSL using Ubuntu 18.04 and anaconda, and ran into the error below. Okay, so on WSL I was able to install with conda install -c bioconda scelvis (perhaps you can also mention in the readme you need the bioconda channel). Pkg_resources.ContextualVersionConflict: (python-dateutil 2.8.1 (/home/munfred/.local/lib/python3.6/site-packages), Requirement.parse('python-dateutil=2.1 python_version >= "2.7"'), )
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Raise VersionConflict(dist, req).with_context(dependent_req) Needed = self.resolve(parse_requirements(requirements))įile "/usr/lib/python3/dist-packages/pkg_resources/_init_.py", line 783, in resolve Thanks :~$ scelvisįile "/usr/lib/python3/dist-packages/pkg_resources/_init_.py", line 574, in _build_masterįile "/usr/lib/python3/dist-packages/pkg_resources/_init_.py", line 892, in require It's getting late so I'll try again tomorrow on another machine, but I just wanted to point these oddities out in case you might have an idea what causes them. So I booted a bigger instance also with Ubuntu 18.04 and Python 3.6.8, but this time at the end of the installation I got (more than once) the error Segmentation fault (core dumped). So I tried installing it on a small Google cloud instance with Ubuntu 18.04 and Python 3.6.8 and it worked, but the instance probably had too little ram because the process kept getting killed when I tried starting it on the demo dataset. Then I tried installing it on a linux machine with CentOS 7 and Python 3.7 using pip3 install scelvis -user and it worked fine. I tried running it with scelvis and got the error below, apparently due to the botocore dependency. Hello, I wanted to try scelvis out so I installed it using pip3 install scelvis on Ubuntu 18.04 with the Windows Linux Subsystem.